Package: ddtlcm
Type: Package
Title: Latent Class Analysis with Dirichlet Diffusion Tree Process
        Prior
Version: 0.2.1
Date: 2024-03-26
Authors@R: c(
     person("Mengbing", "Li", 
            email="mengbing@umich.edu",
            role=c("cre","aut"),
            comment = c(ORCID = "0000-0002-2264-8006")),
     person("Briana", "Stephenson", 
            email="bstephenson@hsph.harvard.edu",
            role=c("ctb")),
     person("Zhenke", "Wu", 
            email="zhenkewu@umich.edu",
            role=c("ctb"),
            comment = c(ORCID = "0000-0001-7582-669X"))
     )
Maintainer: Mengbing Li <mengbing@umich.edu>
Description: Implements a Bayesian algorithm for overcoming weak
        separation in Bayesian latent class analysis. Reference: Li et
        al. (2023) <arXiv:2306.04700>.
Depends: R(>= 4.3)
biocViews:
Imports: ape (>= 5.6-2), data.table (>= 1.14.4), extraDistr (>= 1.9.1),
        ggplot2 (>= 3.4.0), ggpubr (>= 0.6.0), ggtext (>= 0.1.2),
        ggtree (>= 3.4.0), label.switching (>= 1.8), matrixStats (>=
        0.62.0), methods (>= 4.2.3), phylobase (>= 0.8.10), poLCA (>=
        1.6.0.1), testthat (>= 3.1.7), truncnorm (>= 1.0-8), BayesLogit
        (>= 2.1), Matrix (>= 1.5-1), Rdpack (>= 2.5), R.utils (>=
        2.12.2)
Suggests: knitr, parallel, rmarkdown, xfun
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 7.3.1
URL: https://github.com/limengbinggz/ddtlcm
BugReports: https://github.com/limengbinggz/ddtlcm/issues
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 3
Config/pak/sysreqs: libcairo2-dev cmake libfontconfig1-dev
        libfreetype6-dev make libicu-dev libjpeg-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev
Repository: https://limengbinggz.r-universe.dev
Date/Publication: 2025-08-16 14:43:06 UTC
RemoteUrl: https://github.com/limengbinggz/ddtlcm
RemoteRef: HEAD
RemoteSha: d76af1e8ca0820658fa44c340f0e39590c1b5176
NeedsCompilation: no
Packaged: 2026-07-12 06:55:33 UTC; root
Author: Mengbing Li [cre, aut] (ORCID: <https://orcid.org/0000-0002-2264-8006>),
  Briana Stephenson [ctb],
  Zhenke Wu [ctb] (ORCID: <https://orcid.org/0000-0001-7582-669X>)